tdbR00000089

Name	Value
Coding AA:	Phe
Anticodon sequence:	#AA
Organism:	Brassica napus NCBI:txid3708
RNA type:	cytoplasmic
Sequence:	GCGGGGAUALCUCAGDDGGGAGAGCRPCAGABU#AAYAPCUGAAG7DCGCGUGTPCG"UCCACGCUCACCGCACCA
Unmodified sequence:	GCGGGGAUAGCUCAGUUGGGAGAGCGUCAGACUGAAGAUCUGAAGGUCGCGUGUUCGAUCCACGCUCACCGCACCA
Secondary structure:	((((.((..((((........)))).(((((.......))))).....(((((.......))))))).))))....
Homology model or structure extracted from PDB:	Model Download (by Moderna) Download (by RNA Composer) (last update July 2, 2025)
Prepared by:	Database creators
Version:	1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: July 2, 2025
Folding free energy [kcal/mol]:	-22.50
Pre-aligned sequence: Pre-aligned secondary structure:	-GCGGGGAUALCUCAGDD-GGG--AGAGCRPCAGABU#AAYAPCUGAAG-------------------7DCGCGUGTPCG"UCCACGCUCACCGCACCA .((((.((..((((...........)))).(((((.......)))))........................(((((.......))))))).))))....
Publications:	Conservation of plant cytoplasmic tRNA structure. Nucleotide sequence of rape tRNAPhe. M Barciszewska, J Barciszewski, M Wiewiorowski, G Dirheimer, G Keith Biochimie volume: 66 issue: 6 PUBMED ID: 6568121
Comments:	37 IS Y OR W

Model based on:

Moderna

RNA Composer