tdbR00001020
| Name | Value |
|---|---|
| Coding AA: | Glu |
| Anticodon sequence: | SUC |
| Organism: | Vibrio cholerae C6706 NCBI:txid948564 |
| RNA type: | cytoplasmic |
| Sequence: | GUCCCGUUCGUCUAGAGGCCŁAGGACACCGCCCUSUCAC#GCGGUAACAGGGGTUCGACUCCCCUACGGGAUACCA |
| Unmodified sequence: | GUCCCGUUCGUCUAGAGGCCUAGGACACCGCCCUUUCACGGCGGUAACAGGGGUUCGACUCCCCUACGGGAUACCA |
| Secondary structure: | (((((((..((((.........))))((((((.......))))))...(((((.......)))))))))))).... |
| Homology model or structure extracted from PDB: |
Model (last update Oct. 29, 2020) |
| Prepared by: | User |
| Version: | unversioned, created: Oct. 29, 2020, modified: Oct. 29, 2020 |
| Folding free energy [kcal/mol]: | -29.70 |
| Pre-aligned sequence: Pre-aligned secondary structure: |
-GUCCCGUUCGUCUAGA--GGCCŁAGGACACCGCCCUSUCAC#GCGGUA------------------A-CAGGGGTUCGACUCCCCUACGGGAUACCA .(((((((..((((...........))))((((((.......)))))).......................(((((.......)))))))))))).... |
| Comments: | Ł is acetylated acp3U (acacp3U). At the moment when record is added there is no abbreviation for this modification in MODOMICS database |