tdbR00000071

NameValue
Coding AA: Phe
Anticodon sequence: GAA
Organism: Euglena gracilis NCBI:txid3039
RNA type: plastid
Sequence: GCUGGGAUAGCUCAGDUG#DAGAGCGGAGGACUGAA*APCCUUGU7.CACCAGTPCAAAUCUGGUUCCUAGCACCA
Unmodified sequence: GCUGGGAUAGCUCAGUUGGUAGAGCGGAGGACUGAAAAUCCUUGUGACACCAGUUCAAAUCUGGUUCCUAGCACCA
Secondary structure: (((((((..((((........)))).(((((.......))))).....(((((.......))))))))))))....
Homology model or
structure extracted from PDB:
Model Download (by RNA Composer) (last update July 2, 2025)
Prepared by: Database creators
Version: 2 (Oct. 4, 2024), created: Feb. 25, 2019, modified: July 2, 2025
Folding free energy [kcal/mol]: -24.80
Pre-aligned sequence:
Pre-aligned secondary structure:
-GCUGGGAUAGCUCAGDU-G#D--AGAGCGGAGGACUGAA*APCCUUGU-------------------7.CACCAGTPCAAAUCUGGUUCCUAGCACCA
.(((((((..((((...........)))).(((((.......)))))........................(((((.......))))))))))))....
Publications:
  • The first nucleotide sequence of an organelle transfer RNA: chloroplastic tRNAphe.
    S H Chang, C K Brum, M Siberklang, U L RajBhandary, L I Hecker, W E Barnett
    Cell
    volume: 9 issue: 4 PT 2 PUBMED ID: 828079
Comments: 37 IS PROBABLY *; 47 . IS PROBABLY A DERIVATIVE OF 4(ABU)3U
Previous entry: tdbR00000071 (Oct. 4, 2024, 2:53 p.m.)

Secondary structure

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Tertiary structure

Model based on:
RNA Composer
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