tdbR00000188

NameValue
Coding AA: Lys
Anticodon sequence: .UU
Organism: Loligo bleekeri NCBI:txid6617
RNA type: mitochondrial
Sequence: GCCUUCAUALCUCAGDCGGUAGAGCAPCAGACU.UUAANCUGAGG7D?UGGGGTPCG"GUCCCCAULCGGG?UCCA
Unmodified sequence: GCCUUCAUAGCUCAGUCGGUAGAGCAUCAGACUAUUAAUCUGAGGGUCUGGGGUUCGAGUCCCCAUGCGGGCUCCA
Secondary structure: ((((.((..((((........)))).((((.........)))).....(((((.......))))))).))))....
Homology model or
structure extracted from PDB:
Model Download (by RNA Composer) (last update July 2, 2025)
Prepared by: Database creators
Version: 2 (Oct. 4, 2024), created: Feb. 25, 2019, modified: July 2, 2025
Folding free energy [kcal/mol]: -20.60
Pre-aligned sequence:
Pre-aligned secondary structure:
-GCCUUCAUAGCUCAGUC-GGU--AGAGCAUCAGACUAUUAAUCUGAGGGUC-------------------UGGGGUUCGAGUCCCCAUGCGGGCUCCA
.((((.((..((((...........)))).((((.........))))........................(((((.......))))))).))))....
Publications:
  • Mollusk genes encoding lysine tRNA (UUU) contain introns.
    M Matsuo, Y Abe, Y Saruta, N Okada
    Gene
    volume: 165 issue: 2 date: Nov. 20, 1995 PUBMED ID: 8522185
Previous entry: tdbR00000188 (Oct. 4, 2024, 2:53 p.m.)

Secondary structure

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Tertiary structure

Model based on:
RNA Composer
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