tdbR00000128

Name	Value
Coding AA:	Gly
Anticodon sequence:	GCU
Organism:	Halocynthia roretzi NCBI:txid7729
RNA type:	mitochondrial
Sequence:	AAGGGUGAUUAGGAAUGUUAGAAAGPUGCUAPPUUUUUGAUAUPGAGUUCGAAUCUCGAGGCUCUUGCCA
Unmodified sequence:	AAGGGUGAUUAGGAAUGUUAGAAAGUUGCUAUUUUUUUGAUAUUGAGUUCGAAUCUCGAGGCUCUUGCCA
Secondary structure:	((((((....(.(..).)..(((((.......))))).....(((((.......))))).))))))....
Homology model or structure extracted from PDB:	Model Download (by Moderna) Download (by RNA Composer) (last update July 2, 2025)
Prepared by:	Database creators
Version:	1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: July 2, 2025
Folding free energy [kcal/mol]:	99993.40
Pre-aligned sequence: Pre-aligned secondary structure:	-AAGGGUGAUUAGGAA---------UGUUAGAAAGPUGCUAPPUUUUUG-------------------AUAUPGAGUUCGAAUCUCGAGGCUCUUGCCA .((((((....(.(...........).)..(((((.......)))))........................(((((.......))))).))))))....
Publications:	*An extra tRNAGly(UCU) found in ascidian mitochondria responsible for decoding non-universal codons AGA/AGG as glycine.** A Kondow, T Suzuki, S Yokobori, T Ueda, K Watanabe Nucleic acids research volume: 27 issue: 12 date: June 15, 1999 PUBMED ID: 10352185

Model based on:

Moderna

RNA Composer