tdbR00000078

NameValue
Coding AA: Phe
Anticodon sequence: GAA
Organism: Ascaris suum NCBI:txid6253
RNA type: mitochondrial
Sequence: ACUCUGUU"GUUUAUGUUUUAAAAPAPGACPPUGAAKAAGUUGGAAAAUGUUAGGAGUGCCA
Unmodified sequence: ACUCUGUUAGUUUAUGUUUUAAAAUAUGACUUUGAAGAAGUUGGAAAAUGUUAGGAGUGCCA
Secondary structure: (((((....((((........)))).(((((.......)))))....(..)..)))))....
Homology model or
structure extracted from PDB:
Model (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]: 99998.20
Pre-aligned sequence:
Pre-aligned secondary structure:
-ACUCUGUU"GUUUAUGU-UUU--AAAAPAPGACPPUGAAKAAGUUGGA-------------------A-AA----UG---------UUAGGAGUGCCA
.(((((....((((...........)))).(((((.......)))))........................(...............)..)))))....
Publications:
  • Primary and higher order structures of nematode (Ascaris suum) mitochondrial tRNAs lacking either the T or D stem.
    Y Watanabe, H Tsurui, T Ueda, R Furushima, S Takamiya, K Kita, K Nishikawa, K Watanabe
    The Journal of biological chemistry
    volume: 269 issue: 36 date: Sept. 9, 1994 PUBMED ID: 8077242
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