tdbR00000400

Name	Value
Coding AA:	Ser
Anticodon sequence:	7CU
Organism:	Loligo bleekeri NCBI:txid6617
RNA type:	mitochondrial
Sequence:	AAAGGUAAUUAGGAAUAAAAPAAAGCU7CU6ACPUUAUUUUGAGCAACUCAAAACUGUUCUACCUUUUCCA
Unmodified sequence:	AAAGGUAAUUAGGAAUAAAAUAAAGCUGCUAACUUUAUUUUGAGCAACUCAAAACUGUUCUACCUUUUCCA
Secondary structure:	(((((((..(..(..)..).(((((.......)))))......(.(...........).))))))))....
Homology model or structure extracted from PDB:	Model Download (by Moderna) Download (by RNA Composer) (last update July 2, 2025)
Prepared by:	Database creators
Version:	1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: July 2, 2025
Folding free energy [kcal/mol]:	100003.60
Pre-aligned sequence: Pre-aligned secondary structure:	-AAAGGUAAUUAGGAA---------UAAAAPAAAGCU7CU6ACPUUAUU------------------UUGAGCAACUCAAAACUGUUCUACCUUUUCCA .(((((((..(..(...........)..).(((((.......)))))........................(.(...........).))))))))....
Publications:	7-Methylguanosine at the anticodon wobble position of squid mitochondrial tRNA(Ser)GCU: molecular basis for assignment of AGA/AGG codons as serine in invertebrate mitochondria. K Tomita, T Ueda, K Watanabe Biochimica et biophysica acta volume: 1399 issue: 1 date: July 30, 1998 PUBMED ID: 9714749

Model based on:

Moderna

RNA Composer