tdbR00000100

NameValue
Coding AA: Phe
Anticodon sequence: #AA
Organism: Mus musculus NCBI:txid10090
RNA type: cytoplasmic
Sequence: GCCGAAAUALCUC"GDDGGGAGAGCRPPAGABU#AAWAPCUAAAG7UC?CUGGTPCG"UCCCGGGUUUCGGCACCA
Unmodified sequence: GCCGAAAUAGCUCAGUUGGGAGAGCGUUAGACUGAAGAUCUAAAGGUCCCUGGUUCGAUCCCGGGUUUCGGCACCA
Secondary structure: (((((((..((((........)))).(((((.......))))).....(((((.......))))))))))))....
Homology model or
structure extracted from PDB:
Model Download (by Moderna) Download (by RNA Composer) (last update July 2, 2025)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: July 2, 2025
Folding free energy [kcal/mol]: -21.90
Pre-aligned sequence:
Pre-aligned secondary structure:
-GCCGAAAUALCUC"GDD-GGG--AGAGCRPPAGABU#AAWAPCUAAAG-------------------7UC?CUGGTPCG"UCCCGGGUUUCGGCACCA
.(((((((..((((...........)))).(((((.......)))))........................(((((.......))))))))))))....
Publications:
  • Changes of post-transcriptional modification of wye base in tumor-specific tRNAPhe.
    Y Kuchino, E Borek, D Grunberger, J F Mushinski, S Nishimura
    Nucleic acids research
    volume: 10 issue: 20 date: Oct. 25, 1982 PUBMED ID: 6924749
Comments: 32 PARTIALLY C; 34 PARTIALLY G; 37 IS A UNDERMODIFIED WYBUTOSINE

Secondary structure

Your browser does not support the canvas element.

Tertiary structure

Model based on:
Moderna
RNA Composer
We are using technical cookies that are necessary for page to work correctly.