tdbR00000504

Name	Value
Coding AA:	Ini
Anticodon sequence:	CAU
Organism:	Mycoplasma capricolum NCBI:txid2095
RNA type:	cytoplasmic
Sequence:	CGCGGGGUAGAGCAGUDGGDAGCUCGCCGGGCUCAUAACCCGGAGGUCGCAGGUPCGAGUCCUGCCCCCGCAACCA
Unmodified sequence:	CGCGGGGUAGAGCAGUUGGUAGCUCGCCGGGCUCAUAACCCGGAGGUCGCAGGUUCGAGUCCUGCCCCCGCAACCA
Secondary structure:	.((((((..((((........)))).(((((.......))))).....(((((.......))))))))))).....
Homology model or structure extracted from PDB:	Model Download (by Moderna) Download (by RNA Composer) (last update July 2, 2025)
Prepared by:	Database creators
Version:	1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: July 2, 2025
Folding free energy [kcal/mol]:	-34.10
Pre-aligned sequence: Pre-aligned secondary structure:	-CGCGGGGUAGAGCAGUD-GGD--AGCUCGCCGGGCUCAUAACCCGGAG-------------------GUCGCAGGUPCGAGUCCUGCCCCCGCAACCA ..((((((..((((...........)))).(((((.......)))))........................(((((.......))))))))))).....
Publications:	Codon recognition patterns as deduced from sequences of the complete set of transfer RNA species in Mycoplasma capricolum. Resemblance to mitochondria. Y Andachi, F Yamao, A Muto, S Osawa Journal of molecular biology volume: 209 issue: 1 date: Sept. 5, 1989 PUBMED ID: 2478713

Model based on:

Moderna

RNA Composer