tdbR00000614

NameValue
Coding AA: Ini
Anticodon sequence: CAU
Organism: Nanoarchaeum equitans NCBI:txid160232
RNA type: cytoplasmic
Sequence: CGCGGGGUGGGGCAGCCUGGAGUGCCCGGGGGGCUCAUAACCCCCAGGUCCCCGGUUCAAAUCCGGGCCCCGCGUCCA
Unmodified sequence: CGCGGGGUGGGGCAGCCUGGAGUGCCCGGGGGGCUCAUAACCCCCAGGUCCCCGGUUCAAAUCCGGGCCCCGCGUCCA
Secondary structure: (((((((..((((..........)))).(((((.......))))).....(((((.......))))))))))))....
Homology model or
structure extracted from PDB:
Model Download (by Moderna) Download (by RNA Composer) (last update July 2, 2025)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: July 2, 2025
Folding free energy [kcal/mol]: -39.00
Pre-aligned sequence:
Pre-aligned secondary structure:
-CGCGGGGUGGGGCAGCCUGGAG-UGCCCGGGGGGCUCAUAACCCCCAG-------------------GUCCCCGGUUCAAAUCCGGGCCCCGCGUCCA
.(((((((..((((...........)))).(((((.......)))))........................(((((.......))))))))))))....
Publications:
  • Nanoarchaeum equitans creates functional tRNAs from separate genes for their 5'- and 3'-halves.
    Lennart Randau, Richard Münch, Michael J Hohn, Dieter Jahn, Dieter Söll
    Nature
    volume: 433 issue: 7025 date: Feb. 3, 2005 PUBMED ID: 15690044
Comments: DNA SEQUENCE WAS DETERMINED BY REVERSE TRANSCRIPTION OF TRNA;MODIFIED NUCLEOTIDES WERE NOT DETERMINED

Secondary structure

Your browser does not support the canvas element.

Tertiary structure

Model based on:
Moderna
RNA Composer
We are using technical cookies that are necessary for page to work correctly.