tdbR00000536

Name	Value
Coding AA:	Ini
Anticodon sequence:	CAU
Organism:	Salmo salar NCBI:txid8030
RNA type:	cytoplasmic
Sequence:	AGCAGAGUKLCGCAGCGGAAGCGURCUGGGCCCAU6ACCCAGAG7D?GAUGGAUCG"AACCAUCCUCUGCUACCA
Unmodified sequence:	AGCAGAGUGGCGCAGCGGAAGCGUGCUGGGCCCAUAACCCAGAGGUCGAUGGAUCGAAACCAUCCUCUGCUACCA
Secondary structure:	(((((((..((((.......)))).(((((.......))))).....(((((.......))))))))))))....
Homology model or structure extracted from PDB:	Model Download (by Moderna) Download (by RNA Composer) (last update July 2, 2025)
Prepared by:	Database creators
Version:	1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: July 2, 2025
Folding free energy [kcal/mol]:	-26.10
Pre-aligned sequence: Pre-aligned secondary structure:	-AGCAGAGUKLCGCAGC--GGA--AGCGURCUGGGCCCAU6ACCCAGAG-------------------7D?GAUGGAUCG"AACCAUCCUCUGCUACCA .(((((((..((((...........)))).(((((.......)))))........................(((((.......))))))))))))....
Publications:	Nucleotide sequence of salmon testes and salmon liver cytoplasmic initiator tRNA. A M Gillum, N Urquhart, M Smith, U L RajBhandary Cell volume: 6 issue: 3 PUBMED ID: 1053250
Comments:	26 PARTIALLY L

Model based on:

Moderna

RNA Composer