tdbR00000074

NameValue
Coding AA: Phe
Anticodon sequence: GAA
Organism: Tetrahymena pyriformis NCBI:txid5908
RNA type: mitochondrial
Sequence: UGCUUAAGUALCUCAGUGGDAGAGCRUCAGGCUGAAHACCPGAAGGUCAUUGGUCCGAUUCCAUUCUUAGGCACCA
Unmodified sequence: UGCUUAAGUAGCUCAGUGGUAGAGCGUCAGGCUGAAAACCUGAAGGUCAUUGGUCCGAUUCCAUUCUUAGGCACCA
Secondary structure: .(((((((..((((.......)))).(((((.......))))).....(.(((.......))).))))))))....
Homology model or
structure extracted from PDB:
Model Download (by Moderna) Download (by RNA Composer) (last update July 2, 2025)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: July 2, 2025
Folding free energy [kcal/mol]: -16.90
Pre-aligned sequence:
Pre-aligned secondary structure:
UGCUUAAGUALCUCAGU--GGD--AGAGCRUCAGGCUGAAHACCPGAAG-------------------GUCAUUGGUCCGAUUCCAUUCUUAGGCACCA
.(((((((..((((...........)))).(((((.......)))))........................(.(((.......))).))))))))....
Publications:
  • Phenylalanine and tyrosine transfer RNAs encoded by Tetrahymena pyriformis mitochondrial DNA: primary sequence, post-transcriptional modifications, and gene localization.
    M N Schnare, T Y Heinonen, P G Young, M W Gray
    Current genetics
    volume: 9 issue: 5 PUBMED ID: 3939713

Secondary structure

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Tertiary structure

Model based on:
Moderna
RNA Composer
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