tdbR00000338

Name	Value
Coding AA:	Gln
Anticodon sequence:	JUA
Organism:	Tetrahymena thermophila NCBI:txid5911
RNA type:	cytoplasmic
Sequence:	GGUUCCAUALUAPAGDGGDDAGUACUGGGGABUJUA6APCCCUUGAC?UGGGUPCG"AUCCCAGUGGGACCUCCA
Unmodified sequence:	GGUUCCAUAGUAUAGUGGUUAGUACUGGGGACUUUAAAUCCCUUGACCUGGGUUCGAAUCCCAGUGGGACCUCCA
Secondary structure:	(((((((..((((........)))).(((((.......)))))....(((((.......))))))))))))....
Homology model or structure extracted from PDB:	Model Download (by Moderna) Download (by RNA Composer) (last update July 2, 2025)
Prepared by:	Database creators
Version:	1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: July 2, 2025
Folding free energy [kcal/mol]:	-22.80
Pre-aligned sequence: Pre-aligned secondary structure:	-GGUUCCAUALUAPAGD--GGDD-AGUACUGGGGABUJUA6APCCCUUG-------------------A-C?UGGGUPCG"AUCCCAGUGGGACCUCCA .(((((((..((((...........)))).(((((.......)))))........................(((((.......))))))))))))....
Publications:	Dramatic events in ciliate evolution: alteration of UAA and UAG termination codons to glutamine codons due to anticodon mutations in two Tetrahymena tRNAs. N Hanyu, Y Kuchino, S Nishimura, H Beier The EMBO journal volume: 5 issue: 6 PUBMED ID: 16453685

Model based on:

Moderna

RNA Composer