tdbR00000523

Name	Value
Coding AA:	Ini
Anticodon sequence:	CAU
Organism:	Tetrahymena thermophila NCBI:txid5911
RNA type:	cytoplasmic
Sequence:	AGCAGGGUKGCGAAAD#GAAUCGCGUPGGGCUCAU6ACPCAAAA7U?AGAGGAPCG"AACCUCUCUCUGCUACCA
Unmodified sequence:	AGCAGGGUGGCGAAAUGGAAUCGCGUUGGGCUCAUAACUCAAAAGUCAGAGGAUCGAAACCUCUCUCUGCUACCA
Secondary structure:	(((((((..((((.......)))).(((((.......))))).....(((((.......))))))))))))....
Homology model or structure extracted from PDB:	Model Download (by Moderna) Download (by RNA Composer) (last update July 2, 2025)
Prepared by:	Database creators
Version:	1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: July 2, 2025
Folding free energy [kcal/mol]:	-19.70
Pre-aligned sequence: Pre-aligned secondary structure:	-AGCAGGGUKGCGAAAD--#GA--AUCGCGUPGGGCUCAU6ACPCAAAA-------------------7U?AGAGGAPCG"AACCUCUCUCUGCUACCA .(((((((..((((...........)))).(((((.......)))))........................(((((.......))))))))))))....
Publications:	Nucleotide sequence of cytoplasmic initiator tRNA from Tetrahymena thermophila. Y Kuchino, T Mita, S Nishimura Nucleic acids research volume: 9 issue: 18 date: Sept. 25, 1981 PUBMED ID: 7301582

Model based on:

Moderna

RNA Composer