tdbR00000041

Name	Value
Coding AA:	Asp
Anticodon sequence:	8UC
Organism:	Xenopus laevis NCBI:txid8355
RNA type:	cytoplasmic
Sequence:	UCCUCLUUKGUAPAGUGGDGAGUAUCCCCGCCU8UCA?GCGGGAGA??GGGGTPCAAUUCCCCGACGGGGAGCCA
Unmodified sequence:	UCCUCGUUGGUAUAGUGGUGAGUAUCCCCGCCUGUCACGCGGGAGACCGGGGUUCAAUUCCCCGACGGGGAGCCA
Secondary structure:	(((((((..((((........)))).(((((.......)))))....(((((.......))))))))))))....
Homology model or structure extracted from PDB:	Model Download (by Moderna) Download (by RNA Composer) (last update July 2, 2025)
Prepared by:	Database creators
Version:	1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: July 2, 2025
Folding free energy [kcal/mol]:	-26.40
Pre-aligned sequence: Pre-aligned secondary structure:	-UCCUCLUUKGUAPAGU--GGDG-AGUAUCCCCGCCU8UCA?GCGGGAG-------------------A-??GGGGTPCAAUUCCCCGACGGGGAGCCA .(((((((..((((...........)))).(((((.......)))))........................(((((.......))))))))))))....
Publications:	The nucleotide sequence of mannosyl-Q-containing tRNAAsp from Xenopus laevis oocytes. E Haumont, K Nicoghosian, H Grosjean, R J Cedergren Biochimie volume: 66 issue: 7-8 PUBMED ID: 6570443

Model based on:

Moderna

RNA Composer