tdbR00000893

Name	Value
Coding AA:	Ala
Anticodon sequence:	GGC
Organism:	Bacillus subtilis NCBI:txid1423
RNA type:	cytoplasmic
Sequence:	GGGGCCAUAGCUCAGCDGGGAGAGCGCUACGCUGGCAGCGUAGAG7UCAGGGGTPCGAGCCCCCUUGGCUCCACCA
Unmodified sequence:	GGGGCCAUAGCUCAGCUGGGAGAGCGCUACGCUGGCAGCGUAGAGGUCAGGGGUUCGAGCCCCCUUGGCUCCACCA
Secondary structure:	(((((((..((((........)))).(((((.......))))).....(((((.......))))))))))))....
Homology model or structure extracted from PDB:	Model Download (by Moderna) Download (by RNA Composer) (last update July 2, 2025)
Prepared by:	Database creators
Version:	1 (Sept. 6, 2019), created: May 30, 2019, modified: July 2, 2025
Folding free energy [kcal/mol]:	-28.80
Pre-aligned sequence: Pre-aligned secondary structure:	-GGGGCCAUAGCUCAGCD-GGG--AGAGCGCUACGCUGGCAGCGUAGAG-------------------7UCAGGGGTPCGAGCCCCCUUGGCUCCACCA .(((((((..((((...........)))).(((((.......)))))........................(((((.......))))))))))))....
Publications:	MODOMICS: a database of RNA modification pathways. 2017 update. Pietro Boccaletto, Magdalena A Machnicka, Elzbieta Purta, Pawel Piatkowski, Blazej Baginski, Tomasz K Wirecki, Valérie de Crécy-Lagard, Robert Ross, Patrick A Limbach, Annika Kotter, Mark Helm, Janusz M Bujnicki Nucleic acids research volume: 46 issue: D1 date: Jan. 4, 2018 PUBMED ID: 29106616 DOI: 10.1093/nar/gkx1030

Model based on:

Moderna

RNA Composer