tdbR00000399

NameValue
Coding AA: Ser
Anticodon sequence: GCU
Organism: Aedes albopictus NCBI:txid7160
RNA type: mitochondrial
Sequence: GAAAUAUGUUGAUCAAGAAAAGCUGCU6ABUPUUUCUUUAAUGGUUUAAUUCCAUPAUAUUUCUCCA
Unmodified sequence: GAAAUAUGUUGAUCAAGAAAAGCUGCUAACUUUUUCUUUAAUGGUUUAAUUCCAUUAUAUUUCUCCA
Secondary structure: (.((...(........)(((((.......)))))......((((.........))))...)).)...
Homology model or
structure extracted from PDB:
Model Download (by RNA Composer) (last update July 2, 2025)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: July 2, 2025
Folding free energy [kcal/mol]: 20.90
Pre-aligned sequence:
Pre-aligned secondary structure:
-GAAAUAU--GUU-----GA--UC--AAG-AAAAGCUGCU6ABUPUUUCUU------------------UAAUGGUUUAAUUCCAUPAUAUUUCU-CCA
.(.((.....(.................).(((((.......)))))........................((((.........))))...)).)....
Publications:
  • Sequence and structure of a serine transfer RNA with GCU anticodon from mosquito mitochondria.
    D T Dubin, C C HsuChen, G R Cleaves, K D Timko
    Journal of molecular biology
    volume: 176 issue: 2 date: June 25, 1984 PUBMED ID: 6565045

Secondary structure

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Tertiary structure

Model based on:
RNA Composer
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