tdbR00000905

NameValue
Coding AA: Gly
Anticodon sequence: GCC
Organism: Lactococcus lactis NCBI:txid1358
RNA type: cytoplasmic
Sequence: GCGAACGUAGUUCAGGGGUAGAACACAACCUUGCCAUGGUUGGG7UCGCGAGUUCGAAUCUCGUCGUUCGCUCCA
Unmodified sequence: GCGAACGUAGUUCAGGGGUAGAACACAACCUUGCCAUGGUUGGGGUCGCGAGUUCGAAUCUCGUCGUUCGCUCCA
Secondary structure: (((((((..((((.......)))).(((((.......))))).....(((((.......))))))))))))....
Homology model or
structure extracted from PDB:
Model Download (by Moderna) Download (by RNA Composer) (last update July 2, 2025)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: May 30, 2019, modified: July 2, 2025
Folding free energy [kcal/mol]: -23.70
Pre-aligned sequence:
Pre-aligned secondary structure:
-GCGAACGUAGUUCAG-G-GGU--AGAACACAACCUUGCCAUGGUUGGG-------------------7UCGCGAGUUCGAAUCUCGUCGUUCGCUCCA
.(((((((..((((...........)))).(((((.......)))))........................(((((.......))))))))))))....
Publications:
  • Systematic identification of tRNAome and its dynamics in Lactococcus lactis.
    Pranav Puri, Collin Wetzel, Paul Saffert, Kirk W Gaston, Susan P Russell, Juan A Cordero Varela, Pieter van der Vlies, Gong Zhang, Patrick A Limbach, Zoya Ignatova, Bert Poolman
    Molecular microbiology
    volume: 93 issue: 5 epub: Aug. 6, 2014 PUBMED ID: 25040919 DOI: 10.1111/mmi.12710

Secondary structure

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Tertiary structure

Model based on:
Moderna
RNA Composer
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