tdbPDB000011

NameValue
Coding AA: Met
Anticodon sequence: CAU
Organism: Aquifex aeolicus NCBI:txid63363
RNA type: cytoplasmic
Sequence: gGCGGCGUAGCUCAGCUGGUCAGAGCGGGGAUCUCAUAAGUCCCAGGUCGGAGGUUCGAGUCCUCCCGCCGCCACCA
Unmodified sequence: gGCGGCGUAGCUCAGCUGGUCAGAGCGGGGAUCUCAUAAGUCCCAGGUCGGAGGUUCGAGUCCUCCCGCCGCCACCA
Secondary structure: (((.(((..((((.....[...)))).(((((.......))))).....(((((..]....)))))))).)))....
PDB ID: 2csx, 2ct8
Homology model or
structure extracted from PDB:
Extracted Download (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: May 30, 2019, modified: June 26, 2025
Folding free energy [kcal/mol]: -27.20
Pre-aligned sequence:
Pre-aligned secondary structure:
-gGCGGCGUAGCUCAGCU-GGUC-AGAGCGGGGAUCUCAUAAGUCCCAGGUC-------------------GGAGGUUCGAGUCCUCCCGCCGCCACCA
.(((.(((..((((......[....)))).(((((.......)))))........................(((((..]....)))))))).)))....
Publications:
  • Structural basis for anticodon recognition by methionyl-tRNA synthetase.
    Kotaro Nakanishi, Yuri Ogiso, Takashi Nakama, Shuya Fukai, Osamu Nureki
    Nature structural & molecular biology
    volume: 12 issue: 10 epub: Sept. 11, 2005 PUBMED ID: 16155581

Secondary structure

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Tertiary structure

Model based on:
Moderna
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