tdbPDB000015

Name	Value
Coding AA:	Pyl
Anticodon sequence:	CUA
Organism:	Methanosarcina mazei NCBI:txid192952
RNA type:	cytoplasmic
Sequence:	GGAAACCUGAUCAUGUAGAUCGAAUGGACUCUAAAUCCGUUCAGCCGGGUUAGAUUCCCGGGGUUUCCGCCA
Unmodified sequence:	GGAAACCUGAUCAUGUAGAUCGAAUGGACUCUAAAUCCGUUCAGCCGGGUUAGAUUCCCGGGGUUUCCGCCA
Secondary structure:	(((((((.((((...[.))))(((((((.......)))))))..(((((..]....))))))))))))....
PDB ID:	5ud5, 5v6x
Homology model or structure extracted from PDB:	Extracted Download (last update Sept. 6, 2019)
Prepared by:	Database creators
Version:	1 (Sept. 6, 2019), created: May 30, 2019, modified: July 1, 2025
Folding free energy [kcal/mol]:	-29.90
Publications:	Crystal structures reveal an elusive functional domain of pyrrolysyl-tRNA synthetase. Tateki Suzuki, Corwin Miller, Li-Tao Guo, Joanne M L Ho, David I Bryson, Yane-Shih Wang, David R Liu, Dieter Söll Nature chemical biology volume: 13 issue: 12 epub: Oct. 16, 2017 PUBMED ID: 29035363 DOI: 10.1038/nchembio.2497

Model based on:

Moderna

RNA Composer