tdbPDB000024

NameValue
Coding AA: Trp
Anticodon sequence: CCA
Organism: Escherichia coli NCBI:txid562
RNA type: cytoplasmic
Sequence: GCGUAGUUCAAUUGGUAGAGCACCGGUCaAAACCGGGuGuUGGGAGUUCGAGUCUCUCCGCC
Unmodified sequence: GCGUAGUUCAAUUGGUAGAGCACCGGUCaAAACCGGGuGuUGGGAGUUCGAGUCUCUCCGCC
Secondary structure: (((..((((.....[..)))).(((((....))))).....(((((..]....)))))))).
PDB ID: 4ycp
Homology model or
structure extracted from PDB:
Extracted Download (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: May 30, 2019, modified: Sept. 18, 2019
Folding free energy [kcal/mol]: -16.80
Publications:
  • Major reorientation of tRNA substrates defines specificity of dihydrouridine synthases.
    Robert T Byrne, Huw T Jenkins, Daniel T Peters, Fiona Whelan, James Stowell, Naveed Aziz, Pavel Kasatsky, Marina V Rodnina, Eugene V Koonin, Andrey L Konevega, Alfred A Antson
    Proceedings of the National Academy of Sciences of the United States of America
    volume: 112 issue: 19 date: May 12, 2015 epub: April 22, 2015 PUBMED ID: 25902496 DOI: 10.1073/pnas.1500161112
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