tdbPDB000029

Name	Value
Coding AA:	Val
Anticodon sequence:	CAC
Organism:	Thermus thermophilus NCBI:txid274
RNA type:	cytoplasmic
Sequence:	gGGCGGCUAGCUCAGCGGAAGAGCGCUCGCCUCACACGCGAGAGGUCGUAGGUUCAAGUCCUACGCCGCCCACCA
Unmodified sequence:	gGGCGGCUAGCUCAGCGGAAGAGCGCUCGCCUCACACGCGAGAGGUCGUAGGUUCAAGUCCUACGCCGCCCACCA
Secondary structure:	(((((((..((((....[..)))).(((((.......))))).....(((((..]....))))))))))))....
PDB ID:	1gax, 1ivs
Homology model or structure extracted from PDB:	Extracted Download (last update Sept. 6, 2019)
Prepared by:	Database creators
Version:	1 (Sept. 6, 2019), created: May 30, 2019, modified: June 26, 2025
Folding free energy [kcal/mol]:	-34.00
Pre-aligned sequence: Pre-aligned secondary structure:	-gGGCGGCUAGCUCAG---CGG-AAGAGCGCUCGCCUCACACGCGAGAG-------------------GUCGUAGGUUCAAGUCCUACGCCGCCCACCA .(((((((..((((.......[...)))).(((((.......)))))........................(((((..]....))))))))))))....
Publications:	Structural basis for double-sieve discrimination of L-valine from L-isoleucine and L-threonine by the complex of tRNA(Val) and valyl-tRNA synthetase. S Fukai, O Nureki, S Sekine, A Shimada, J Tao, D G Vassylyev, S Yokoyama Cell volume: 103 issue: 5 date: Nov. 22, 2000 PUBMED ID: 11114335 Mechanism of molecular interactions for tRNA(Val) recognition by valyl-tRNA synthetase. Shuya Fukai, Osamu Nureki, Shun-Ichi Sekine, Atsushi Shimada, Dmitry G Vassylyev, Shigeyuki Yokoyama RNA (New York, N.Y.) volume: 9 issue: 1 PUBMED ID: 12554880

Model based on:

Moderna