tdbPDB000037

NameValue
Coding AA: Glu
Anticodon sequence: CUC
Organism: Thermus thermophilus NCBI:txid274
RNA type: cytoplasmic
Sequence: gGCCCCAUCGUCUAGCGGUUAGGACGCGGCCCUCUCAAGGCCGAAACGGGGGUUCGAUUCCCCCUGGGGUCACCA
Unmodified sequence: gGCCCCAUCGUCUAGCGGUUAGGACGCGGCCCUCUCAAGGCCGAAACGGGGGUUCGAUUCCCCCUGGGGUCACCA
Secondary structure: (((((((..((((....[...)))).(((((.......)))))....(((((..]....))))))))))))....
PDB ID: 1g59, 1n77, 1n78, 2cv0, 2cv1, 2cv2, 2dxi
Homology model or
structure extracted from PDB:		 Extracted Download (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: May 30, 2019, modified: June 26, 2025
Folding free energy [kcal/mol]: -34.40
Pre-aligned sequence:
Pre-aligned secondary structure:		 -gGCCCCAUCGUCUAG---CGGUUAGGACGCGGCCCUCUCAAGGCCGAA-------------------A-CGGGGGUUCGAUUCCCCCUGGGGUCACCA
.(((((((..((((.......[...)))).(((((.......)))))........................(((((..]....))))))))))))....
Publications:
  • Structural basis for anticodon recognition by discriminating glutamyl-tRNA synthetase.
    S Sekine, O Nureki, A Shimada, D G Vassylyev, S Yokoyama
    Nature structural biology
    volume: 8 issue: 3 PUBMED ID: 11224561
  • ATP binding by glutamyl-tRNA synthetase is switched to the productive mode by tRNA binding.
    Shun-Ichi Sekine, Osamu Nureki, Daniel Y Dubois, Stéphane Bernier, Robert Chênevert, Jacques Lapointe, Dmitry G Vassylyev, Shigeyuki Yokoyama
    The EMBO journal
    volume: 22 issue: 3 date: Feb. 3, 2003 PUBMED ID: 12554668
  • Structural bases of transfer RNA-dependent amino acid recognition and activation by glutamyl-tRNA synthetase.
    Shun-ichi Sekine, Mika Shichiri, Stéphane Bernier, Robert Chênevert, Jacques Lapointe, Shigeyuki Yokoyama
    Structure (London, England : 1993)
    volume: 14 issue: 12 PUBMED ID: 17161369

Secondary structure

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Tertiary structure

Model based on:
Moderna
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