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tdbPDB000044

NameValue
Coding AA: Phe
Anticodon sequence: GAA
Organism: Thermotoga maritima NCBI:txid2336
RNA type: cytoplasmic
Sequence: gGCCAGGUAGCUCAGuuGGUAGAGCACUGGACUGAAAAUCCAGGUGUCGGCGGUUCGAUUCCGCCCCUGGCCACCA
Unmodified sequence: gGCCAGGUAGCUCAGuuGGUAGAGCACUGGACUGAAAAUCCAGGUGUCGGCGGUUCGAUUCCGCCCCUGGCCACCA
Secondary structure: ...((((..(((...........)))...................(((((((......))))))).(((((.......))))))))).....
PDB ID: 3wfq, 3wfr, 3wfs
Homology model or
structure extracted from PDB:
Extracted Download (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: May 30, 2019, modified: Aug. 11, 2026
Folding free energy [kcal/mol]: -23.10
Pre-aligned sequence:
Pre-aligned secondary structure:
-GCCCGGAUGAUCCUCA--GUGG-UCUGGGGUGCAGGCUUCAAACCUGUAGCUG--UUUA---GCGACAGAGUGGUUCAAUUCCACCUUUCGGGCGCCA
.(((((((((..(((((..(.....))))))(((((((.....)))))))((((..((.......))))))((((.......)))))))))))))....
Publications:
  • Translocation and rotation of tRNA during template-independent RNA polymerization by tRNA nucleotidyltransferase.
    Seisuke Yamashita, Daijiro Takeshita, Kozo Tomita
    Structure (London, England : 1993)
    volume: 22 issue: 2 date: Feb. 4, 2014 epub: Jan. 2, 2014 PUBMED ID: 24389024 DOI: 10.1016/j.str.2013.12.002

Secondary structure

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Tertiary structure

Model based on:
Moderna