tdbR00000598

Name	Value
Coding AA:	Sec
Anticodon sequence:	UCA
Organism:	Chlamydomonas reinhardtii NCBI:txid3055
RNA type:	cytoplasmic
Sequence:	GCCGCUGUGACCUUGGCGGGUGCUGAGUGCGGUCUUCA+AACCGUAGAGGCCGGAAGGCCUAGUGGUPCA"UUCCACCUCGGCGGCGCCA
Unmodified sequence:	GCCGCUGUGACCUUGGCGGGUGCUGAGUGCGGUCUUCAAAACCGUAGAGGCCGGAAGGCCUAGUGGUUCAAUUCCACCUCGGCGGCGCCA
Secondary structure:	(((((((....((((........)))).(((((.......)))))................(((((.......)))).))))))))....
Homology model or structure extracted from PDB:	Model Download (by RNA Composer) (last update July 2, 2025)
Prepared by:	Database creators
Version:	unversioned, created: Feb. 25, 2019, modified: July 2, 2025
Folding free energy [kcal/mol]:	-18.20
Pre-aligned sequence: Pre-aligned secondary structure:	-GCCGCUGU_CUUGGCG--GGU-GCUGAGUGCGGUCUUCA+AACCGUAGAGGCC--GGAA---GGCCU---AGUGGUPCA"UUCCA_UCGGCGGCGCCA .(((((((..((((...........)))).(((((.......)))))........................(.(((.......))).))))))))....
Publications:	Chlamydomonas reinhardtii selenocysteine tRNA[Ser]Sec. Mahadev Rao, Bradley A Carlson, Sergey V Novoselov, Donald P Weeks, Vadim N Gladyshev, Dolph L Hatfield RNA (New York, N.Y.) volume: 9 issue: 8 PUBMED ID: 12869703
Comments:	MODIFIED NUCLEOTIDES WERE NOT DETERMINED
Previous entry:	tdbR00000598 (Sept. 22, 2019, 5:59 p.m.)

Model based on:

RNA Composer