tdbR00000568

Name	Value
Coding AA:	Sec
Anticodon sequence:	UCA
Organism:	Escherichia coli NCBI:txid562
RNA type:	cytoplasmic
Sequence:	GGAAGAUCGUCGUCUCCGGDGAGGCGGCUGGACUUCA+AUCCAGUUGGGGCCGCAAGCGGUCCCGGGCAGGTPCGACUCCUGUGAUCUUCCGCCA
Unmodified sequence:	GGAAGAUCGUCGUCUCCGGUGAGGCGGCUGGACUUCAAAUCCAGUUGGGGCCGCAAGCGGUCCCGGGCAGGUUCGACUCCUGUGAUCUUCCGCCA
Secondary structure:	((((((((..((((........))))((((((.......)))))).....................(((((.......)))))))))))))....
Homology model or structure extracted from PDB:	Model Download (by RNA Composer) (last update July 2, 2025)
Prepared by:	Database creators
Version:	unversioned, created: Feb. 25, 2019, modified: July 2, 2025
Folding free energy [kcal/mol]:	-28.10
Pre-aligned sequence: Pre-aligned secondary structure:	-_AAGAUCGUCGUCUCC--GGDG-AGGCGGCUGGACUUCA+AUCCAGU-UGGGGCCGC_GCGGUCCCG--GGCAGGTPCGACUCCUGUGAUCUU_GCCA ..((((((..((((...........))))((((((.......)))))).......................(((((.......))))))))))).....
Publications:	The selenocysteine-inserting opal suppressor serine tRNA from E. coli is highly unusual in structure and modification. A Schön, A Böck, G Ott, M Sprinzl, D Söll Nucleic acids research volume: 17 issue: 18 date: Sept. 25, 1989 PUBMED ID: 2529478
Previous entry:	tdbR00000568 (Sept. 22, 2019, 6:02 p.m.)

Model based on:

RNA Composer