tdbR00000404

NameValue
Coding AA: Ser
Anticodon sequence: GCU
Organism: Homo sapiens NCBI:txid9606
RNA type: mitochondrial
Sequence: GAGAAAGCUCACAAGAACUGCU6ACUCAUGCCCCCAUGUCUAACAACAUGGCUUUCUCACCA
Unmodified sequence: GAGAAAGCUCACAAGAACUGCUAACUCAUGCCCCCAUGUCUAACAACAUGGCUUUCUCACCA
Secondary structure: (((((((....((.((.........)).))...((..............)))))))))....
Homology model or
structure extracted from PDB:
Model (last update Sept. 6, 2019)
Prepared by: Database creators
Version: unversioned, created: Feb. 25, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]: -4.10
Pre-aligned sequence:
Pre-aligned secondary structure:
-GAGAAAG-C----------------UCACAAGAACUGCU6ACUCAUGCCC--------------------CCAUGUCUAAC_CAUGGCUUUCUCACCA
.(((((((.....................((.((.........)).)).......................((.............)))))))))....
Publications:
  • A mammalian mitochondrial serine transfer RNA lacking the "dihydrouridine" loop and stem.
    M H de Bruijn, P H Schreier, I C Eperon, B G Barrell, E Y Chen, P W Armstrong, J F Wong, B A Roe
    Nucleic acids research
    volume: 8 issue: 22 PUBMED ID: 6906662
Previous entry: tdbR00000404 (Sept. 22, 2019, 6:04 p.m.)
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