tdbR00000601

NameValue
Coding AA: Pyr
Anticodon sequence: CUA
Organism: Methanosarcina barkeri NCBI:txid2208
RNA type: cytoplasmic
Sequence: GGAAACC4GAUCAUGUAGAUCGAAUGGACUCUAAAUCCGUUCAGCCGGG]UAGAUUCCCGGGGUUUCCGCCA
Unmodified sequence: GGAAACCUGAUCAUGUAGAUCGAAUGGACUCUAAAUCCGUUCAGCCGGGUUAGAUUCCCGGGGUUUCCGCCA
Secondary structure: (((((((.((((.....)))).((((((.......))))))...(((((.......))))))))))))....
Homology model or
structure extracted from PDB:
Model (last update Sept. 6, 2019)
Prepared by: Database creators
Version: unversioned, created: Feb. 25, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]: -26.20
Pre-aligned sequence:
Pre-aligned secondary structure:
-GGAAACC4-GAUCA-U--G-U--AGAUCG_UGGACUCUAAAUCCG_CA---------------------GCCGGG]UAGAUUCCCGGGGUUUCCGCCA
.(((((((..((((...........))))..((((.......)))).........................(((((.......))))))))))))....
Publications:
  • An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
    Carla Polycarpo, Alexandre Ambrogelly, Amélie Bérubé, SusAnn M Winbush, James A McCloskey, Pamela F Crain, John L Wood, Dieter Söll
    Proceedings of the National Academy of Sciences of the United States of America
    volume: 101 issue: 34 epub: Aug. 16, 2004 PUBMED ID: 15314242
Previous entry: tdbR00000601 (Sept. 22, 2019, 6:10 p.m.)
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