tdbR00000010

NameValue
Coding AA: Ala
Anticodon sequence: VGC
Organism: Escherichia coli NCBI:txid562
RNA type: cytoplasmic
Sequence: GGGGCUA4AGCUCAGCDGGGAGAGCGCCUGCUUVGCACGCAGGAG7UCUGCGGTPCGAUCCCGCAUAGCUCCACCA
Unmodified sequence: GGGGCUAUAGCUCAGCUGGGAGAGCGCCUGCUUUGCACGCAGGAGGUCUGCGGUUCGAUCCCGCAUAGCUCCACCA
Secondary structure: (((((((..((((........)))).(((((.......))))).....(((((.......))))))))))))....
Homology model or
structure extracted from PDB:
Model Download (last update March 25, 2020)
Prepared by: Database creators
Version: unversioned, created: Feb. 25, 2019, modified: March 25, 2020
Folding free energy [kcal/mol]: -29.20
Publications:
  • Spacer transfer RNAs in ribosomal RNA transcripts of E. coli: processing of 30S ribosomal RNA in vitro.
    E Lund, J E Dahlberg
    Cell
    volume: 11 issue: 2 PUBMED ID: 329997
Comments: At position 32 could be also Um () At position 34 could be also mcmo5U
Previous entry: tdbR00000010 (March 25, 2020, 1:11 p.m.)
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