tdbR00000987

NameValue
Coding AA: Thr
Anticodon sequence: CGU
Organism: Escherichia coli NCBI:txid562
RNA type: cytoplasmic
Sequence: GCCGAUA4AGCUCAGDDGGDAGAGCAGCGCAUUCGUeAPGCGAAG7UCGUAGGTPCGACUCCUAUUAUCGGCACCA
Unmodified sequence: GCCGAUAUAGCUCAGUUGGUAGAGCAGCGCAUUCGUAAUGCGAAGGUCGUAGGUUCGACUCCUAUUAUCGGCACCA
Secondary structure: (((((((..((((........))))..((((.......))))......(((((.......))))))))))))....
Homology model or
structure extracted from PDB:
Model (last update March 26, 2020)
Prepared by: User
Version: unversioned, created: March 26, 2020, modified: March 26, 2020
Folding free energy [kcal/mol]: -22.70
Pre-aligned sequence:
Pre-aligned secondary structure:
-GCCGAUA4AGCUCAGDD-GGD--AGAGCAGCGCAUUCGUeAPGCGAAG------------------- 7UCGUAGGTPCGACUCCUAUUAUCGGCACCA
.(((((((..((((...........))))..((((.......)))).........................(((((.......))))))))))))....
Publications:
  • A cyclic form of N6-threonylcarbamoyladenosine as a widely distributed tRNA hypermodification.
    Kenjyo Miyauchi, Satoshi Kimura, Tsutomu Suzuki
    Nature chemical biology
    volume: 9 issue: 2:105-111 epub: Dec. 16, 2012 PUBMED ID: 23242255 DOI: doi: 10.1038/nchembio.1137
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