We are using technical cookies that are necessary for page to work correctly.

tdbR00000987

NameValue
Coding AA: Thr
Anticodon sequence: CGU
Organism: Escherichia coli NCBI:txid562
RNA type: cytoplasmic
Sequence: GCCGAUA4AGCUCAGDDGGDAGAGCAGCGCAUUCGUeAPGCGAAG7UCGUAGGTPCGACUCCUAUUAUCGGCACCA
Unmodified sequence: GCCGAUAUAGCUCAGUUGGUAGAGCAGCGCAUUCGUAAUGCGAAGGUCGUAGGUUCGACUCCUAUUAUCGGCACCA
Secondary structure: (((((((..((((........))))..((((.......))))......(((((.......))))))))))))....
Homology model or
structure extracted from PDB:		 Model Download (by RNA Composer) (last update July 2, 2025)
Prepared by: User
Version: 3 (June 29, 2026), created: March 26, 2020, modified: June 29, 2026
Folding free energy [kcal/mol]: -22.70
Pre-aligned sequence:
Pre-aligned secondary structure:		 -GCCGAUA4AGCUCAGDD-GGD--AGAGCAGCGCAUUCGUeAPGCGAAG-------------------7UCGUAGGTPCGACUCCUAUUAUCGGCACCA
.(((((((..((((...........))))..((((.......)))).........................(((((.......))))))))))))....
Publications:
  • A cyclic form of N6-threonylcarbamoyladenosine as a widely distributed tRNA hypermodification.
    Kenjyo Miyauchi, Satoshi Kimura, Tsutomu Suzuki
    Nature chemical biology
    volume: 9 issue: 2 epub: Dec. 16, 2012 PUBMED ID: 23242255 DOI: 10.1038/nchembio.1137

Aminoacylation

NameValue
Positive identity elements regulating aminoacylation: G1-C72; C2-G71; G4-C69; G5-C68; G34; G35; U36
Negative identity elements antideterminants of aminoacylation: NA
Citation: Hasegawa,T., Miyano,M., Himeno,H., Sano,Y., Kimura,K. and Shimizu,M. (1992) Identity determinants of E. coli threonine tRNA. Biochem. Biophys Res. Commun., 184, 478–484.
DOI: 10.1016/0006-291X(92)91219-G
PMID: 1567450

Secondary structure

Your browser does not support the canvas element.

Tertiary structure

Model based on:
RNA Composer