tdbR00000181

Name	Value
Coding AA:	Lys
Anticodon sequence:	SUU
Organism:	Escherichia coli NCBI:txid562
RNA type:	cytoplasmic
Sequence:	GGGUCGUUAGCUCAGDDGGDAGAGCAGUUGACUSUUeAPCAAUUG7XCGCAGGTPCGAAUCCUGCACGACCCACCA
Unmodified sequence:	GGGUCGUUAGCUCAGUUGGUAGAGCAGUUGACUUUUAAUCAAUUGGUCGCAGGUUCGAAUCCUGCACGACCCACCA
Secondary structure:	(((((((..((((........))))((((((.......))))))....(((((.......))))))))))))....
Homology model or structure extracted from PDB:	Model Download (by Moderna) Download (by RNA Composer) (last update July 2, 2025)
Prepared by:	Database creators
Version:	unversioned, created: Feb. 25, 2019, modified: July 2, 2025
Folding free energy [kcal/mol]:	-27.10
Pre-aligned sequence: Pre-aligned secondary structure:	-GGGUCGUUAGCUCAGDD-GGD--AGAGCAGUUGACUSUUeAPCAAUUG-------------------7XCGCAGGTPCGAAUCCUGCACGACCCACCA .(((((((..((((...........))))((((((.......)))))).......................(((((.......))))))))))))....
Publications:	Primary structure of tRNA-Lys of E. coli B. K Chakraburtty, A Steinschneider, R V Case, A H Mehler Nucleic acids research volume: 2 issue: 11 PUBMED ID: 802509
Comments:	Modified nucleoside at position 37 - ct6A - was previously identified as t6A, probably due to isolation conditions
Previous entry:	tdbR00000181 (March 26, 2020, 10:26 a.m.)

Model based on:

Moderna

RNA Composer