tdbR00000988

Name	Value
Coding AA:	Ala
Anticodon sequence:	5GC
Organism:	Staphylococcus aureus NCBI:txid1280
RNA type:	cytoplasmic
Sequence:	GGGGGCUUAGCUCAGCUGGGAGAGCGCCUGCUU5GCACGCAGGAGGUCAGCGGUUCGAUCCCGCUAGUCUCCACCA
Unmodified sequence:	GGGGGCUUAGCUCAGCUGGGAGAGCGCCUGCUUUGCACGCAGGAGGUCAGCGGUUCGAUCCCGCUAGUCUCCACCA
Secondary structure:	(((((((..((((........)))).(((((.......))))).....(((((.......))))))))))))....
Homology model or structure extracted from PDB:	Model Download (by RNA Composer) (last update July 2, 2025)
Prepared by:	User
Version:	unversioned, created: May 11, 2020, modified: July 2, 2025
Folding free energy [kcal/mol]:	-28.40
Pre-aligned sequence: Pre-aligned secondary structure:	-GGGGGCUUAGCUCAGCU-GGG--AGAGCGCCUGCUU5GCACGCAGGAG-------------------GUCAGCGGUUCGAUCCCGCUAGUCUCCACCA .(((((((..((((...........)))).(((((.......)))))........................(((((.......))))))))))))....
Publications:	Mapping post-transcriptional modifications in Staphylococcus aureus tRNAs by nanoLC/MSMS. Laura Antoine, Philippe Wolff, Eric Westhof, Pascale Romby, Stefano Marzi Biochimie volume: 164 epub: July 8, 2019 PUBMED ID: 31295507 DOI: 10.1016/j.biochi.2019.07.003

Model based on:

RNA Composer