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tdbR00000999

NameValue
Coding AA: Leu
Anticodon sequence: UAA
Organism: Staphylococcus aureus NCBI:txid1280
RNA type: cytoplasmic
Sequence: GCCGGGGUGGCGGAACDGGCAGACGCACAGGACUUAAAAUCCUGCGGUGAGAGAUCACCGUACCGGTUCGAUUCCGGUCCUCGGCACCA
Unmodified sequence: GCCGGGGUGGCGGAACUGGCAGACGCACAGGACUUAAAAUCCUGCGGUGAGAGAUCACCGUACCGGTUCGAUUCCGGUCCUCGGCACCA
Secondary structure: (((((((..(((...........))).(((((.......))))).................(((((.......))))))))))))....
Prepared by: User
Version: 3 (June 29, 2026), created: May 21, 2020, modified: June 29, 2026
Folding free energy [kcal/mol]: -27.70
Pre-aligned sequence:
Pre-aligned secondary structure:
-GCCGGGGUGGCGGAACD-GGCA-GACGCACAGGACUUAAAAUCCUGC-GGUG---AGAGA--UCACCG-UACCGGTUCGAUUCCGGUCCUCGGCACCA
.(((((((..(((.............))).(((((.......)))))........................(((((.......))))))))))))....
Publications:
  • MODOMICS: a database of RNA modification pathways. 2017 update.
    Pietro Boccaletto, Magdalena A Machnicka, Elzbieta Purta, Pawel Piatkowski, Blazej Baginski, Tomasz K Wirecki, Valérie de Crécy-Lagard, Robert Ross, Patrick A Limbach, Annika Kotter, Mark Helm, Janusz M Bujnicki
    Nucleic acids research
    volume: 46 issue: D1 date: Jan. 4, 2018 PUBMED ID: 29106616 DOI: 10.1093/nar/gkx1030

Secondary structure

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