tdbR00000413

Name	Value
Coding AA:	Ser
Anticodon sequence:	GCU
Organism:	Candida cylindracea NCBI:txid44322
RNA type:	cytoplasmic
Sequence:	GUUAAUGUGGCCMGAGDGGDDAAGGCRCUUCC'UGCU+AGGAAGJGGGCUCUGCCCG=GCAGGTPCG"AUCCUGUCAUUAACGCCA
Unmodified sequence:	GUUAAUGUGGCCCGAGUGGUUAAGGCGCUUCCCUGCUAAGGAAGUGGGCUCUGCCCGAGCAGGUUCGAAUCCUGUCAUUAACGCCA
Secondary structure:	(((((((..(((...........)))((((((.......)))))).............(((((.......))))))))))))....
Homology model or structure extracted from PDB:	Model Download (by Moderna) Download (by RNA Composer) (last update July 2, 2025)
Prepared by:	Database creators
Version:	1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: July 2, 2025
Folding free energy [kcal/mol]:	-20.20
Pre-aligned sequence: Pre-aligned secondary structure:	-GUUAAUGUGGCCMGAGD-GGDD-AAGGCRCUUCC'UGCU+AGGAAGJ-GGGC---UCU-----GCCCG-=GCAGGTPCG"AUCCUGUCAUUAACGCCA .(((((((..(((.............)))((((((.......)))))).......................(((((.......))))))))))))....
Publications:	Characterization of serine and leucine tRNAs in an asporogenic yeast Candida cylindracea and evolutionary implications of genes for tRNA(Ser)CAG responsible for translation of a non-universal genetic code. T Suzuki, T Ueda, T Yokogawa, K Nishikawa, K Watanabe Nucleic acids research volume: 22 issue: 2 date: Jan. 25, 1994 PUBMED ID: 8121794

Model based on:

Moderna

RNA Composer