tdbR00001035
Name | Value |
---|---|
Coding AA: | Gln |
Anticodon sequence: | $UG |
Organism: | Vibrio cholerae C6706 NCBI:txid948564 |
RNA type: | cytoplasmic |
Sequence: | AGGUCUG4CGCCAAGCGGUAAGGCAACGGGUU$UGAUCCCGUCAŁACCCAGGUUCGAAUCCUGGCAGACCUGCCA |
Unmodified sequence: | AGGUCUGUCGCCAAGCGGUAAGGCAACGGGUUUUGAUCCCGUCAUACCCAGGUUCGAAUCCUGGCAGACCUGCCA |
Secondary structure: | (((((((..(((.........))).(((((.......))))).....(((((.......)))))))))))).... |
Homology model or structure extracted from PDB: |
Model (last update Oct. 29, 2020) |
Prepared by: | User |
Version: | unversioned, created: Oct. 29, 2020, modified: Oct. 29, 2020 |
Folding free energy [kcal/mol]: | -27.20 |
Pre-aligned sequence: Pre-aligned secondary structure: |
-AGGUCUG4CGCCAAGC--GGU--AAGGCAACGGGUU$UGAUCCCGUCA-------------------ŁACCCAGGUUCGAAUCCUGGCAGACCUGCCA .(((((((..(((.............))).(((((.......)))))........................(((((.......)))))))))))).... |
Comments: | Ł is acetylated acp3U (acacp3U). At the moment when record is added there is no abbreviation for this modification in MODOMICS database |