tdbR00000411

Name	Value
Coding AA:	Ser
Anticodon sequence:	IGA
Organism:	Candida cylindracea NCBI:txid44322
RNA type:	cytoplasmic
Sequence:	GGCAUCUUGGCMGAGD#GDDAAGGCRAAAGAPUIGA+APCUUUJGGGCUCUGCCCG?GCAGGTPCG"GUCCUGCAGAUGUCGCCA
Unmodified sequence:	GGCAUCUUGGCCGAGUGGUUAAGGCGAAAGAUUAGAAAUCUUUUGGGCUCUGCCCGCGCAGGUUCGAGUCCUGCAGAUGUCGCCA
Secondary structure:	(((((((..(((..........)))((((((.......)))))).............(((((.......))))))))))))....
Homology model or structure extracted from PDB:	Model Download (by Moderna) Download (by RNA Composer) (last update July 2, 2025)
Prepared by:	Database creators
Version:	1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: July 2, 2025
Folding free energy [kcal/mol]:	-21.90
Pre-aligned sequence: Pre-aligned secondary structure:	-GGCAUCUUGGCMGAGD--#GDD-AAGGCRAAAGAPUIGA+APCUUUJ-GGGC---UCU-----GCCCG-?GCAGGTPCG"GUCCUGCAGAUGUCGCCA .(((((((..(((.............)))((((((.......)))))).......................(((((.......))))))))))))....
Publications:	Characterization of serine and leucine tRNAs in an asporogenic yeast Candida cylindracea and evolutionary implications of genes for tRNA(Ser)CAG responsible for translation of a non-universal genetic code. T Suzuki, T Ueda, T Yokogawa, K Nishikawa, K Watanabe Nucleic acids research volume: 22 issue: 2 date: Jan. 25, 1994 PUBMED ID: 8121794

Model based on:

Moderna

RNA Composer