tdbR00000552

Name	Value
Coding AA:	Tyr
Anticodon sequence:	.UA
Organism:	Phaseolus vulgaris NCBI:txid3885
RNA type:	mitochondrial
Sequence:	GGGAGAGUGGCCGAGD#GDCAAAAGCLACAGACU.UAHAPCUGUUGAAGUUUUUCUACGUAGGTPCGAAUCCUGCCUCUCCCACCA
Unmodified sequence:	GGGAGAGUGGCCGAGUGGUCAAAAGCGACAGACUAUAAAUCUGUUGAAGUUUUUCUACGUAGGUUCGAAUCCUGCCUCUCCCACCA
Secondary structure:	(((((((..((.............))((((((.......)))))).............(((((.......))))))))))))....
Homology model or structure extracted from PDB:	Model Download (by RNA Composer) (last update July 2, 2025)
Prepared by:	Database creators
Version:	2 (Oct. 4, 2024), created: Feb. 25, 2019, modified: July 2, 2025
Folding free energy [kcal/mol]:	-21.90
Pre-aligned sequence: Pre-aligned secondary structure:	-GGGAGAGUGGCCGAGD--#GDCAAAAGCLACAGACU.UAHAPCUGUU-GAAG---UU------UUUCUACGUAGGTPCGAAUCCUGCCUCUCCCACCA .(((((((..((...............))((((((.......)))))).......................(((((.......))))))))))))....
Publications:	Sequences of two bean mitochondria tRNAs(Tyr) which differ in the level of post-transcriptional modification and have a prokaryotic-like large extra-loop. L Maréchal, P Guillemaut, J H Weil Plant molecular biology volume: 5 issue: 6 PUBMED ID: 24306988 DOI: 10.1007/BF00037555
Comments:	18 PARTIALLY MODIFIED; 34 . IS A MODIFIED NUCLEOTIDE; 37 + OR *
Previous entry:	tdbR00000552 (Oct. 4, 2024, 2:53 p.m.)

Model based on:

RNA Composer