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tdbR00000130

NameValue
Coding AA: Gly
Anticodon sequence: .CC
Organism: Saccharomyces cerevisiae NCBI:txid4932
RNA type: cytoplasmic
Sequence: GGGCGGUUAGUGPAGDGGDDAUCAUCCCACCCU.CCAAGGUGGGGACACGGGTPCGAUUCUCGUACCGCUCACCA
Unmodified sequence: GGGCGGUUAGUGUAGUGGUUAUCAUCCCACCCUACCAAGGUGGGGACACGGGUUCGAUUCUCGUACCGCUCACCA
Secondary structure: (((((((..(((..........)))((((((.......))))))...(((((.......))))))))))))....
Homology model or
structure extracted from PDB:		 Model Download (by RNA Composer) (last update July 2, 2025)
Prepared by: Database creators
Version: 2 (Oct. 4, 2024), created: Feb. 25, 2019, modified: June 29, 2026
Folding free energy [kcal/mol]: -24.50
Pre-aligned sequence:
Pre-aligned secondary structure:		 -GGGCGGUUAGUGPAGD--GGDD-AUCAUCCCACCCU.CCAAGGUGGGG-------------------A-CACGGGTPCGAUUCUCGUACCGCUCACCA
.(((((((..(((.............)))((((((.......)))))).......................(((((.......))))))))))))....
Publications:
  • Frameshift suppressor mutations affecting the major glycine transfer RNAs of Saccharomyces cerevisiae.
    M D Mendenhall, P Leeds, H Fen, L Mathison, M Zwick, C Sleiziz, M R Culbertson
    Journal of molecular biology
    volume: 194 issue: 1 date: March 5, 1987 PUBMED ID: 3039147
Comments: 34 . IS A MODIFIED NUCLEOTIDE
Previous entry: tdbR00000130 (Oct. 4, 2024, 2:53 p.m.)

Aminoacylation

NameValue
Positive identity elements regulating aminoacylation: A/U73; G1-C72; G3-C70; (G10-Y25):G45; C35; C36
Negative identity elements antideterminants of aminoacylation: NA
Citation: Nameki,N., Tamura,K., Asahara,H. and Hasegawa,T. (1997) Recognition of tRNAGly by three widely diverged glycyl-tRNA synthetases. J. Mol. Biol., 268, 640–647.
DOI: 10.1006/jmbi.1997.0993
PMID: 9171287

Secondary structure

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Tertiary structure

Model based on:
RNA Composer