tdbR00000571

Name	Value
Coding AA:	Sec
Anticodon sequence:	NCA
Organism:	Homo sapiens NCBI:txid9606
RNA type:	cytoplasmic
Sequence:	GCCCGGAU_CCUCAGUGGUCUGGGGUGCAGGCUNCA+ACCUGUAGCUGUCUAGCGACAGAGUGGUPCA"UUCCA_UUUCGGGCGCCA
Unmodified sequence:	GCCCGGAUGCCUCAGUGGUCUGGGGUGCAGGCUUCAAACCUGUAGCUGUCUAGCGACAGAGUGGUUCAAUUCCACUUUCGGGCGCCA
Secondary structure:	(((((((..((((........))))((((((.......))))))...............(((((.......))))))))))))....
PDB ID:	3a3a, 3hl2, 4zdo, 4zdp
Homology model or structure extracted from PDB:	Extracted Download (last update Sept. 6, 2019)
Prepared by:	Database creators
Version:	unversioned, created: Feb. 25, 2019, modified: June 26, 2025
Folding free energy [kcal/mol]:	-27.40
Pre-aligned sequence: Pre-aligned secondary structure:	-GCCCGGAU_CCUCAGU--GGUC-UGGGGUGCAGGCUNCA+ACCUGUAGCUGUC--UAGC---GACAG---AGUGGUPCA"UUCCA_UUUCGGGCGCCA .(((((((..((((...........))))((((((.......)))))).......................(((((.......))))))))))))....
Publications:	Minor serine tRNA containing anticodon NCA (C4 RNA) from human and mouse cells. N Kato, H Hoshino, F Harada Biochemistry international volume: 7 issue: 5 PUBMED ID: 6435631
Comments:	34 N IS PROBABLY A MODIFIED U
Previous entry:	tdbR00000571 (Nov. 7, 2024, 9:54 a.m.)

Model based on:

Moderna

RNA Composer