tdbR00000630
| Name | Value |
|---|---|
| Coding AA: | Ala |
| Anticodon sequence: | HGC |
| Organism: | Homo sapiens NCBI:txid9606 |
| RNA type: | cytoplasmic |
| Sequence: | GGGGAAUUAGCUCAAAUGGUAGAGCGCUCGCUUHGCHUGCGAGAGGUAGCGGGAUCGAUGCCCGCAUUCUCCACCA |
| Unmodified sequence: | GGGGAAUUAGCUCAAAUGGUAGAGCGCUCGCUUAGCAUGCGAGAGGUAGCGGGAUCGAUGCCCGCAUUCUCCACCA |
| Secondary structure: | (((((((..((((........)))).(((((.......))))).....(((((.......)))))))))))).... |
| Homology model or structure extracted from PDB: |
Model Download (by Moderna) Download (by RNA Composer) (last update July 2, 2025) |
| Prepared by: | Database creators |
| Version: | 3 (June 29, 2026), created: May 30, 2019, modified: June 29, 2026 |
| Folding free energy [kcal/mol]: | -29.60 |
| Pre-aligned sequence: Pre-aligned secondary structure: |
-GGGGAAUUAGCUCAAAU-GGU--AGAGCGCUCGCUUHGCHUGCGAGAG-------------------GUAGCGGGAUCGAUGCCCGCAUUCUCCACCA .(((((((..((((...........)))).(((((.......)))))........................(((((.......)))))))))))).... |
| Publications: |
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| Comments: | Sequence obtained from hydro-tRNAseq; modified nucleosides were not determined by MS, only predicted by mismatches frequency; relative abundance among tRNAAla in HEK293 cells: 4.8% |
| Previous entry: | tdbR00000630 (Nov. 8, 2024, 1:32 p.m.) |
Aminoacylation
| Name | Value |
|---|---|
| Positive identity elements regulating aminoacylation: | G3-U70 |
| Negative identity elements antideterminants of aminoacylation: | NA |
| Citation: | Hou,Y.M. and Schimmel,P. (1989) Evidence that a major determinant for the identity of a transfer RNA is conserved in evolution. Biochemistry, 28, 6800–6804. |
| DOI: | 10.1021/bi00443a003 |
| PMID: | 2684266 |
Secondary structure
Tertiary structure
Model based on: