tdbR00000588

Name	Value
Coding AA:	Asp
Anticodon sequence:	GUC
Organism:	Aeropyrum pernix NCBI:txid56636
RNA type:	cytoplasmic
Sequence:	GCCGCGGUAGUAUAGCCUGGACUAGUAUGCGGGCCUGUCAAGCCCGUGACCCGGGUUCAAAUCCCGGCCGCGGCGCCA
Unmodified sequence:	GCCGCGGUAGUAUAGCCUGGACUAGUAUGCGGGCCUGUCAAGCCCGUGACCCGGGUUCAAAUCCCGGCCGCGGCGCCA
Secondary structure:	(((((((..((((...........)))).(((((.......)))))....(((((.......))))))))))))....
Homology model or structure extracted from PDB:	Model Download (last update Sept. 6, 2019)
Prepared by:	Database creators
Version:	1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]:	-30.40
Pre-aligned sequence: Pre-aligned secondary structure:	-GCCGCGGUAGUAUAGCCUGGACUAGUAUGCGGGCCUGUCAAGCCCGUG-------------------A-CCCGGGUUCAAAUCCCGGCCGCGGCGCCA .(((((((..((((...........)))).(((((.......)))))........................(((((.......))))))))))))....
Publications:	Characterization of a whole set of tRNA molecules in an aerobic hyper-thermophilic Crenarchaeon, Aeropyrum pernix K1. Syuji Yamazaki, Hisashi Kikuchi, Yutaka Kawarabayasi DNA research : an international journal for rapid publication of reports on genes and genomes volume: 12 issue: 6 epub: Feb. 23, 2006 PUBMED ID: 16769697
Comments:	MODIFIED NUCLEOTIDES WERE NOT DETERMINED