tdbR00000033

NameValue
Coding AA: Asp
Anticodon sequence: QUC
Organism: Didelphis virginiana NCBI:txid9267
RNA type: mitochondrial
Sequence: AAGAUAUU"LUAAAAUUCAUUACAPAACUPUQUCAUAGUUAAAUUAUAGGUPUAACUCCUAUAUAUCUUACCA
Unmodified sequence: AAGAUAUUAGUAAAAUUCAUUACAUAACUUUGUCAUAGUUAAAUUAUAGGUUUAACUCCUAUAUAUCUUACCA
Secondary structure: (((((((..((((......)))).(((((.......)))))....(((((.......))))))))))))....
Homology model or
structure extracted from PDB:
Model Download (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]: -9.60
Pre-aligned sequence:
Pre-aligned secondary structure:
-AAGAUAUU"LUAAAA---UUC--AUUACAPAACUPUQUCAUAGUUAAA-------------------U-UAUAGGUPUAACUCCUAUAUAUCUUACCA
.(((((((..((((...........)))).(((((.......)))))........................(((((.......))))))))))))....
Publications:
  • C to U editing and modifications during the maturation of the mitochondrial tRNA(Asp) in marsupials.
    M Mörl, M Dörner, S Pääbo
    Nucleic acids research
    volume: 23 issue: 17 date: Sept. 11, 1995 PUBMED ID: 7567446
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