tdbR00001111
| Name | Value |
|---|---|
| Coding AA: | Met |
| Anticodon sequence: | MAU |
| Organism: | Vibrio cholerae NCBI:txid1854 |
| RNA type: | cytoplasmic |
| Sequence: | GGCUACG4AGCUCAGUUGGDDAGAGCACAUCACUMAUeAUGAUGGG7XCACAGGTPCAAAUCCCGUCGUAGCCACCA |
| Unmodified sequence: | GGCUACGUAGCUCAGUUGGUUAGAGCACAUCACUCAUAAUGAUGGGGUCACAGGUUCAAAUCCCGUCGUAGCCACCA |
| Secondary structure: | (((((((..((((.........)))).(((((.......))))).....(((((.......)))))))))))).... |
| Prepared by: | Database creators |
| Version: | 3 (June 29, 2026), created: June 29, 2026, modified: Aug. 11, 2026 |
| Folding free energy [kcal/mol]: | -23.30 |
| Pre-aligned sequence: Pre-aligned secondary structure: |
-GGCUACG4AGCUCAGUU-GGDD-AGAGCACAUCACUMAUeAUGAUGGG7XC-------------------ACAGGTPCAAAUCCCGUCGUAGCCACCA .(((((((..((((...........)))).(((((.......)))))........................(((((.......)))))))))))).... |
| Publications: |
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| Comments: | At the position 47 there was a higher misincorporation frequency in samples from bacteria in the log phase in comparison to stationary phase, in Escherichia coli the tendency was reversed. For V. cholerae samples from cecal fluid of the infected infant rabits, the misincorporation and termination were similar to those from the log phase |