tdbR00001113

Name	Value
Coding AA:	Gln
Anticodon sequence:	$UG
Organism:	Vibrio cholerae NCBI:txid1854
RNA type:	cytoplasmic
Sequence:	AGGUCUG4CGCCAAGCGGDAAGGCAACGGGUU#UGɿUCCCGUCAUACCUAGGTPCGAAUCCUAGCAGACCUGCCA
Unmodified sequence:	AGGUCUGUCGCCAAGCGGUAAGGCAACGGGUUGUGAUCCCGUCAUACCUAGGUUCGAAUCCUAGCAGACCUGCCA
Secondary structure:	(((((((..(((.........))).(((((.......))))).....(((((.......))))))))))))....
Prepared by:	Database creators
Version:	3 (June 29, 2026), created: June 29, 2026, modified: Aug. 11, 2026
Folding free energy [kcal/mol]:	-25.20
Pre-aligned sequence: Pre-aligned secondary structure:	-AGGUCUG4CGCCAAGC--GGD--AAGGCAACGGGUU#UGɿUCCCGUCAUAC-------------------CUAGGTPCGAAUCCUAGCAGACCUGCCA .(((((((..(((.............))).(((((.......)))))........................(((((.......))))))))))))....
Publications:	Comparative tRNA sequencing and RNA mass spectrometry for surveying tRNA modifications. Satoshi Kimura, Peter C Dedon, Matthew K Waldor Nature chemical biology volume: 16 issue: 9 epub: June 8, 2020 PUBMED ID: 32514182 DOI: 10.1038/s41589-020-0558-1
Comments:	Position U46 contains a novel modification - acacp(^3)U