tdbR00000379

NameValue
Coding AA: Ser
Anticodon sequence: NGA
Organism: Enterobacteria phage T4 NCBI:txid10665
RNA type: viral
Sequence: GGAGGCG4GGCAGAGU#GDDUAAUGCACCGGUBUNGA*AACCGGCAGUCGCUCCGGCGACUCAUAGGTPCAAAUCCUAUCGCCUCCGCCA
Unmodified sequence: GGAGGCGUGGCAGAGUGGUUUAAUGCACCGGUCUUGAAAACCGGCAGUCGCUCCGGCGACUCAUAGGUUCAAAUCCUAUCGCCUCCGCCA
Secondary structure: (((((((..(((...........))).(((((.......)))))..................(((((.......))))))))))))....
Homology model or
structure extracted from PDB:
Model Download (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]: -25.10
Pre-aligned sequence:
Pre-aligned secondary structure:
-GGAGGCG4GGCAGAGU--#GDDUAAUGCACCGGUBUNGA*AACCGGC-AGUCGC-UCCG--GCGACU--CAUAGGTPCAAAUCCUAUCGCCUCCGCCA
.(((((((..(((.............))).(((((.......)))))........................(((((.......))))))))))))....
Publications:
  • Nucleotide alterations in bacteriophage T4 serine transfer RNA that affect the conversion of precursor RNA into transfer RNA.
    W H McClain, B G Barrell, J G Seidman
    Journal of molecular biology
    volume: 99 issue: 4 date: Dec. 25, 1975 PUBMED ID: 1214302
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