tdbR00000022

Name	Value
Coding AA:	Asp
Anticodon sequence:	GUC
Organism:	Enterobacteria phage T5 NCBI:txid10726
RNA type:	viral
Sequence:	GCGACCGGGGCUGGCUUGGUAAUGGUACUCCCCUGUCACGGGAGAGAAUGUGGGTPCAAAUCCCAPCGGUCGCGCCA
Unmodified sequence:	GCGACCGGGGCUGGCUUGGUAAUGGUACUCCCCUGUCACGGGAGAGAAUGUGGGUUCAAAUCCCAUCGGUCGCGCCA
Secondary structure:	(((((((..((((.........)))).(((((.......))))).....(((((.......))))))))))))....
Homology model or structure extracted from PDB:	Model Download (by Moderna) Download (by RNA Composer) (last update July 2, 2025)
Prepared by:	Database creators
Version:	1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: July 2, 2025
Folding free energy [kcal/mol]:	-26.10
Pre-aligned sequence: Pre-aligned secondary structure:	-GCGACCGGGGCUGGCUU-GGUA-AUGGUACUCCCCUGUCACGGGAGAG-------------------AAUGUGGGTPCAAAUCCCAPCGGUCGCGCCA .(((((((..((((...........)))).(((((.......)))))........................(((((.......))))))))))))....
Publications:	Nucleotide sequence of the bacteriophage T5 DNA fragment which contains the gene for tRNAAsp. M G Shlyapnikov, V N Ksenzenko, V M Kryukov, A A Bayev European journal of biochemistry volume: 156 issue: 2 date: April 15, 1986 PUBMED ID: 3516691
Comments:	54 PARTIALLY U ; 65 PARTIALLY MODIFIED

Model based on:

Moderna

RNA Composer