tdbR00000008

NameValue
Coding AA: Ala
Anticodon sequence: GGC
Organism: Escherichia coli NCBI:txid562
RNA type: cytoplasmic
Sequence: GGGGCUANAGCUCAGCDGGGAGAGCGCUUGCAUGGCAUGCAAGAG7UCAGCGGTPCGAUCCCGCUUAGCUCCACCA
Unmodified sequence: GGGGCUAUAGCUCAGCUGGGAGAGCGCUUGCAUGGCAUGCAAGAGGUCAGCGGUUCGAUCCCGCUUAGCUCCACCA
Secondary structure: (((((((..((((........)))).(((((.......))))).....(((((.......))))))))))))....
Homology model or
structure extracted from PDB:
Model Download (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]: -26.90
Pre-aligned sequence:
Pre-aligned secondary structure:
-GGGGCUANAGCUCAGCD-GGG--AGAGCGCUUGCAUGGCAUGCAAGAG-------------------7UCAGCGGTPCGAUCCCGCUUAGCUCCACCA
.(((((((..((((...........)))).(((((.......)))))........................(((((.......))))))))))))....
Publications:
  • Isolation and nucleotide sequence analysis of tRNAAlaGGC from Escherichia coli K-12.
    B H Mims, N E Prather, E J Murgola
    Journal of bacteriology
    volume: 162 issue: 2 PUBMED ID: 3886638
Comments: 8 PARTIALLY MODIFIED ; 46 PARTIALLY G7
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