tdbR00000009

Name	Value
Coding AA:	Ala
Anticodon sequence:	VGC
Organism:	Escherichia coli NCBI:txid562
RNA type:	cytoplasmic
Sequence:	GGGGGCA4AGCUCAGCDGGGAGAGCGCCUGCUUVGCACGCAGGAG7UCUGCGGTPCGAUCCCGCGCGCUCCCACCA
Unmodified sequence:	GGGGGCAUAGCUCAGCUGGGAGAGCGCCUGCUUUGCACGCAGGAGGUCUGCGGUUCGAUCCCGCGCGCUCCCACCA
Secondary structure:	((((((...((((........)))).(((((.......))))).....(((((.......))))).))))))....
Homology model or structure extracted from PDB:	Model Download (by Moderna) Download (by RNA Composer) (last update July 2, 2025)
Prepared by:	Database creators
Version:	1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: July 2, 2025
Folding free energy [kcal/mol]:	-29.70
Pre-aligned sequence: Pre-aligned secondary structure:	-GGGGGCA4AGCUCAGCD-GGG--AGAGCGCCUGCUUVGCACGCAGGAG-------------------7UCUGCGGTPCGAUCCCGCGCGCUCCCACCA .((((((...((((...........)))).(((((.......)))))........................(((((.......))))).))))))....
Publications:	Primary structure of E. coli alanine transfer RNA: relation to the yeast phenylalanyl tRNA synthetase recognition site. R J Williams, W Nagel, B Roe, B Dudock Biochemical and biophysical research communications volume: 60 issue: 4 date: Oct. 23, 1974 PUBMED ID: 4607604
Comments:	8 PARTIALLY MODIFIED

Model based on:

Moderna

RNA Composer