tdbR00000009

NameValue
Coding AA: Ala
Anticodon sequence: VGC
Organism: Escherichia coli NCBI:txid562
RNA type: cytoplasmic
Sequence: GGGGGCA4AGCUCAGCDGGGAGAGCGCCUGCUUVGCACGCAGGAG7UCUGCGGTPCGAUCCCGCGCGCUCCCACCA
Unmodified sequence: GGGGGCAUAGCUCAGCUGGGAGAGCGCCUGCUUUGCACGCAGGAGGUCUGCGGUUCGAUCCCGCGCGCUCCCACCA
Secondary structure: ((((((...((((........)))).(((((.......))))).....(((((.......))))).))))))....
Homology model or
structure extracted from PDB:
Model Download (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]: -29.70
Pre-aligned sequence:
Pre-aligned secondary structure:
-GGGGGCA4AGCUCAGCD-GGG--AGAGCGCCUGCUUVGCACGCAGGAG-------------------7UCUGCGGTPCGAUCCCGCGCGCUCCCACCA
.((((((...((((...........)))).(((((.......)))))........................(((((.......))))).))))))....
Publications:
  • Primary structure of E. coli alanine transfer RNA: relation to the yeast phenylalanyl tRNA synthetase recognition site.
    R J Williams, W Nagel, B Roe, B Dudock
    Biochemical and biophysical research communications
    volume: 60 issue: 4 date: Oct. 23, 1974 PUBMED ID: 4607604
Comments: 8 PARTIALLY MODIFIED
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