tdbR00000045
| Name | Value |
|---|---|
| Coding AA: | Glu |
| Anticodon sequence: | SUC |
| Organism: | Escherichia coli NCBI:txid562 |
| RNA type: | cytoplasmic |
| Sequence: | GUCCCCUUCGUCPAGAGGCCCAGGACACCGCCCUSUC/CGGCGGUAACAGGGGTPCGAAUCCCCUGGGGGACGCCA |
| Unmodified sequence: | GUCCCCUUCGUCUAGAGGCCCAGGACACCGCCCUUUCACGGCGGUAACAGGGGUUCGAAUCCCCUGGGGGACGCCA |
| Secondary structure: | (((((((..((((.........))))((((((.......))))))...(((((.......)))))))))))).... |
| Homology model or structure extracted from PDB: |
Model Download (by Moderna) Download (by RNA Composer) (last update July 2, 2025) |
| Prepared by: | Database creators |
| Version: | 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: June 29, 2026 |
| Folding free energy [kcal/mol]: | -32.80 |
| Pre-aligned sequence: Pre-aligned secondary structure: |
-GUCCCCUUCGUCPAGA--GGCCCAGGACACCGCCCUSUC/CGGCGGUA-------------------A-CAGGGGTPCGAAUCCCCUGGGGGACGCCA .(((((((..((((...........))))((((((.......)))))).......................(((((.......)))))))))))).... |
| Publications: |
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Aminoacylation
| Name | Value |
|---|---|
| Positive identity elements regulating aminoacylation: | G1-C72; U2-A71; U11-A24; U13-G22:A46 base triple; absence of residue 47; mnm5s2U34; U35; C36; A37 |
| Negative identity elements antideterminants of aminoacylation: | NA |
| Citation: | Sekine,S., Nureki,O., Sakamoto,K., Niimi,T., Tateno,M., Go,M., Kohno,T., Brisson,A., Lapointe,J. and Yokoyama,S. (1996) Major identity determinants in the ‘augmented D helix’ of tRNAGlu from Escherichia coli. J. Mol. Biol., 256, 685–700. |
| DOI: | 10.1006/jmbi.1996.0118 |
| PMID: | 8642591 |
Secondary structure
Tertiary structure
Model based on: